Index

_

__init__() (pyCADD.Dance.algorithm.consensus.Average method) (pyCADD.Dance.algorithm.consensus.Geo_Average method) (pyCADD.Dance.algorithm.consensus.Maximum method) (pyCADD.Dance.algorithm.consensus.Minimum method) (pyCADD.Dance.common.Dancer method) (pyCADD.Dance.common.Evaluator method) (pyCADD.Dance.common.Matrix method)

A

add_clf() (pyCADD.Dance.common.Evaluator method) add_dataset() (pyCADD.Dance.common.Dancer method) add_neg_dataset() (pyCADD.Dance.common.Dancer method)

add_pos_dataset() (pyCADD.Dance.common.Dancer method) Average (class in pyCADD.Dance.algorithm.consensus) average() (in module pyCADD.Dance.algorithm.consensus)

C

calc_scp_score() (in module pyCADD.Dance.core)

D

Dancer (class in pyCADD.Dance.common)

del_clf() (pyCADD.Dance.common.Evaluator method)

E

Evaluator (class in pyCADD.Dance.common)

F

fit() (pyCADD.Dance.algorithm.consensus.Average method) (pyCADD.Dance.algorithm.consensus.Geo_Average method) (pyCADD.Dance.algorithm.consensus.Maximum method) (pyCADD.Dance.algorithm.consensus.Minimum method)

from_csv() (pyCADD.Dance.common.Matrix class method) from_pickle() (pyCADD.Dance.common.Matrix class method) from_splited_data() (pyCADD.Dance.common.Matrix class method)

G

gbt_default_params (pyCADD.Dance.common.Evaluator property) Geo_Average (class in pyCADD.Dance.algorithm.consensus) GeoMean (class in pyCADD.Dance.algorithm.consensus) get_clf() (pyCADD.Dance.common.Evaluator method) get_clfs_dict() (pyCADD.Dance.common.Evaluator method) get_gbt_default_params() (pyCADD.Dance.common.Evaluator method)

get_lr_default_params() (pyCADD.Dance.common.Evaluator method) get_merged_data() (pyCADD.Dance.common.Dancer method) get_rf_default_params() (pyCADD.Dance.common.Evaluator method) get_test_data() (pyCADD.Dance.common.Matrix method) get_train_data() (pyCADD.Dance.common.Matrix method) get_weights() (pyCADD.Dance.common.Evaluator static method)

H

hyperparam_tuning() (in module pyCADD.Dance.core)

L

load_params() (pyCADD.Dance.common.Evaluator method)

lr_default_params (pyCADD.Dance.common.Evaluator property)

M

Matrix (class in pyCADD.Dance.common) Maximum (class in pyCADD.Dance.algorithm.consensus) maximum() (in module pyCADD.Dance.algorithm.consensus) Mean (class in pyCADD.Dance.algorithm.consensus) Minimum (class in pyCADD.Dance.algorithm.consensus) minimum() (in module pyCADD.Dance.algorithm.consensus) module pyCADD.Dance pyCADD.Dance.algorithm pyCADD.Dance.algorithm.consensus pyCADD.Dance.algorithm.default_params pyCADD.Dance.common pyCADD.Dance.core pyCADD.Dance.metrics

N

nef_score() (in module pyCADD.Dance.metrics)

P

prepare_data() (pyCADD.Dance.common.Dancer method) print_classifier_info() (pyCADD.Dance.common.Evaluator method) print_cv_results() (pyCADD.Dance.common.Evaluator method) pyCADD.Dance module pyCADD.Dance.algorithm module pyCADD.Dance.algorithm.consensus module

pyCADD.Dance.algorithm.default_params module pyCADD.Dance.common module pyCADD.Dance.core module pyCADD.Dance.metrics module

R

repeat_cv() (pyCADD.Dance.common.Evaluator method)

rf_default_params (pyCADD.Dance.common.Evaluator property)

S

save() (pyCADD.Dance.common.Dancer method) save_csv() (pyCADD.Dance.common.Dancer method) save_params() (pyCADD.Dance.common.Evaluator method)

save_pickle() (pyCADD.Dance.common.Dancer method) search_params() (pyCADD.Dance.common.Evaluator method) split_train_test_data() (pyCADD.Dance.common.Matrix method) std() (in module pyCADD.Dance.algorithm.consensus)

T

testset_eval() (pyCADD.Dance.common.Evaluator method)