Index

_

__init__() (pyCADD.Demand.config.BaseQueryCfg method) (pyCADD.Demand.config.BaseQueryPDB method) (pyCADD.Demand.config.QueryConfigKeys method) (pyCADD.Demand.core.QueryClient method)

A

AUTHOR_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute)

B

BaseQueryCfg (class in pyCADD.Demand.config)

BaseQueryPDB (class in pyCADD.Demand.config)

C

clean_pdb_data() (pyCADD.Demand.core.QueryClient method)

D

DATA_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute)

G

generate_inputfile() (pyCADD.Demand.core.QueryClient method) get_apo() (pyCADD.Demand.core.QueryClient method) get_mutation_pdb() (pyCADD.Demand.core.QueryClient method)

get_mutations() (pyCADD.Demand.core.QueryClient method) get_nested_value() (in module pyCADD.Demand.core) get_query() (pyCADD.Demand.config.BaseQueryCfg method) (pyCADD.Demand.config.BaseQueryPDB method)

M

module pyCADD.Demand pyCADD.Demand.cli pyCADD.Demand.config pyCADD.Demand.core

N

NONPOLYMER_CHAIN_ID_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) NONPOLYMER_ENTITY_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) NONPOLYMER_ENTITY_NUM_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute)

NONPOLYMER_ID_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) NONPOLYMER_NAME_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) NONPOLYMER_SMILES_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute)

P

parse_uniport() (in module pyCADD.Demand.core) pdb_save_dir (pyCADD.Demand.core.QueryClient property) PDBID_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) POLYMER_CHAIN_ID_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) POLYMER_ENTITY_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) POLYMER_ENTITY_NUM_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) POLYMER_MUTATION_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) POLYMER_MUTATION_NUM_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) POLYMER_NAME_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute)

POLYMER_TYPE_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) POLYMER_UNIPROT_ID_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) pyCADD.Demand module pyCADD.Demand.cli module pyCADD.Demand.config module pyCADD.Demand.core module

Q

query() (pyCADD.Demand.core.QueryClient method) query_pdb() (in module pyCADD.Demand.core)

query_uniprot_id_on_pdb() (in module pyCADD.Demand.core) QueryClient (class in pyCADD.Demand.core) QueryConfigKeys (class in pyCADD.Demand.config)

R

REF_DOI_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute)

REFERENCE_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute) RESOLUTION_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute)

T

TITLE_KEYS (pyCADD.Demand.config.QueryConfigKeys attribute)

U

uniprot_save_dir (pyCADD.Demand.core.QueryClient property)